Data Service

Data Access to Open Data

Software developed in the course of the Department of Translational Genomics is available for download. Technical queries and feedback should be sent directly to the authors.

Link to GEO: Gene expression data

Sos et al. 2009 Predicting drug susceptibility of non-small cell lung cancers based on genetic lesions. J Clin Invest. 2009 Jun;119(6):1727-40

Link to GEO: SNP Array

Weiss et al. 2010 Frequent and Focal FGFR1 Amplification Associates With Therapeutically Tractable FGFR1 Dependency in Squamous-cell Lung Cancer. Sci Transl Med 2010 Dec 15;2(62):62ra93.

Download Dataset

Peifer et al. 2012, Integrative genome analyses identify key somatic driver mutations of small-cell lung cancer. Nat Genet. 2012 Oct; 44(10):1104-10.

Link to GEO: SNP Array

Sos et al. 2012 A framework for identification of actionable cancer genome dependencies in small cell lung cancer. Proc Natl Acad Sci U S A. 2012 Oct 16;109(42):17034-9.

Link to GEO: SNP Arrays

Sos et al. 2009 Predicting drug susceptibility of non-small cell lung cancers based on genetic lesions. J Clin Invest. 2009 Jun;119(6):1727-40

Link to dataset

Clinical Lung Cancer Genome Project (CLCGP) and Network Genomic Medicine (NGM) 2013 A genomics-based classification of human lung tumors. Sci Transl Med. 2013 Oct 30;5(209):209ra153.

Link to dataset

Malchers et al. 2013 Cell-autonomous and non-cell-autonomous mechanisms of transformation by amplified FGFR1 in lung cancer. Cancer Discov. 2013 Dec 3.

Link to software

Lu et al. 2013 CGARS: Cancer Genome Analysis by Rank Sums.

Link to data of murine SCLC tumors

George et al. 2015 Comprehensive genomic profiles of small cell lung cancer. Nature 2015